CDS
| Accession Number | TCMCG018C15979 |
| gbkey | CDS |
| Protein Id | XP_011653046.2 |
| Location | complement(join(7377798..7377858,7377969..7378037,7378134..7378250,7378505..7378617,7378728..7378802,7379272..7379397,7379748..7380313,7380408..7380464,7380565..7381119,7381965..7382148,7382286..7382429,7382537..7382611,7382706..7382776,7383095..7383197,7383282..7383508,7383801..7383918,7384310..7384440,7385017..7385041)) |
| Gene | LOC101218078 |
| GeneID | 101218078 |
| Organism | Cucumis sativus |
Protein
| Length | 938aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA182750 |
| db_source | XM_011654744.2 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Cucumis sativus] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGAAGCGTGGATATAAACTACAGGAATTTGCGGCACACTCAGGAAATGTCAACTGTCTAAGTATTGGGAAGAAAGCTTGCCGACTGTTCATAACTGGTGGAGATGATTATAAAGTCAACCTTTGGGCAATTGGAAAACCTAATTCTTTGATGAGTCTTTGTGGTCATACTAATCCAGTTGAATCAGTAGCTTTTGATTCAGCAGAAGTTTTGGTGCTCGCCGGAGCTTCATCTGGTGCAATAAAGTTGTGGGATCTTGAAGAGGCTAAAATGGTTCGCACTCTATCTGGTCATAGATCAAACTGCACGGCAGTTGAATTTCATCCATTTGGCGAGTTCTTTGCATCAGGTTCTAGAGACACAAATCTTAAAATCTGGGATATTAGAAAGAAAGGTTGCATTCACACATACAAGGGGCACACACAAGGCATTAGTACTATCAAGTTCACACCAGATGGTCGTTGGGTAGTCTCTGGTGGTTTTGATAGTGCTGTGAAGGTATGGGATTTAACTGCTGGAAAGTTGATGCATGATTTCAAGTTCCATGAAGGACCTATTCGATCCATTGATTTTCATCCACTTGAGTTTCTCCTTGCGACAGGGTCAGCAGACAAAACTGTGAAATTCTGGGATTTGGAAACCTTTGAATTGATTGGATCTACAAGACCCGAGGCTGCTGGAGTACGTGCAATCACCTTCCATCCAGATGGGAGGACCCTGTTTTCTGGTCTGGATGAAAGTCTGAAGGTATATTCGTGGGAGCCTGTTATTTGTCATGATTCTGTTGACATGGGATGGTCAACACTTGGTGACCTTTGCATTCATGCTGGGAAACTCTTGAGTTGCTCATCTTATCGAAATTCTGTTGGAGTTTGGGTAGCTGATGTAGCGCTTATTGAGCCATATGGAGCTAGTTCAGTATCTGGGCAAAAGGAGCCAAAAGAACAGAATCTCGGTTCTGCCTTCAAGAACAGTCTAGCTTCGAAAAGCACTGGAAGTGATTTGGTGACTTCAAATCTGCAATCTCTGTCTCCTGATTATGAAACAAAGGAGATAAAGAATATATACATAGACACAACTGGTGGAAAACCTGTTTCACCACAGAAGGCAGAATCTTTAAGCTCCCCCAAAATTGTTTTTGCATTGGATTCGAAGGAGATTAGCTACAATGCAAGCAAAAAGCAAAATCTTGCATCGCGAGTAGAAGTGAAATCTAGTGAATTATCAAAAGATAAACCCCCAGTTATACCTTGTGATAGCCCTGAGGTTAAAGACCCACCAAGCTCTGTGAGGGAATCTATCACATTTTCGAAGACAAGGCGTGGAATGTTACTCAGGCCGGCTCATATAAGAAAGCCATCCAATAGTAAAATAGACCTTGAAAAACTCTCTGTGTCAGTTGATTCAAGTAGAAAAACTGATCTTGAGAGACTACCAGTTGTAGATTCTGTAAATGTCTGTAATACCACCAATGACTTGAATAAAGCTCCAGTACAAAACTTGAAAACAAGTGTTGTGTCAGAAGTAATACATGTAGATCCTTGTGGAACAAATTCTGATCTCATTAGTATTGAGAAGTTCGAAAAAATCCCCTCTGTATCAGCTGAGACAACTTCAGAACAAGAAACCTGCAACAAATCAGTTGAGAATAGCGAAGGGGCAAACTCTGTTAAATTTGTAAATGGAGTTGCAGTTGTTCCTGGAAGGACACGGACTCTTGTTGAGAGGTTTGAAAGGAGAGAAAAAACGAATGATGTACAGACAACAATTTCACCATCTAATGTCCTTGAACCAGAGAAAACGAGAGAACAAACTAATAGCTTAGAAGTACAAGTGGTTACACCTCAGATCCTTGAAACTGAGAAGACACATGAACAAACTAATGACTTTAGAGTACATGAAGTGACTATGCCTTCTCATGTCTCTGAAACAGAGACGAGATGTGAACGGACTAGTAACTATGAAGTACAGGCAGTGGCTATTCCTTCCCATGTCTCTGAACCTGAAAAGGCAAGAGAACAAACTAACAACTATGAAGTACGAGCAATGGTTATTCCTCGTACCCCTGAAACTAAGAGGATGGGTATTAACTATGAAGCAAAACCAAGAAGTAACCATGAAGCAAAACCAAGAAGTAACTATGAAGCAAAACCAAGAAGTAACTATGAAGCAAAAACAAGAAATAACTATGAAGCAAAATCAACTCTTATATCTTCTCATGTCCCTGAAACAGATAAAACCGACAATTTACAGAAAGGAGAACCTCAAATTTCTGGAAGAGATTCTACCTCTGCAAATGACAGGGATGTCATTGAAGATTTGATGCAATCTCATGATGTATTCTTAAGTACCCTCCGATCCCGCTTGACAAAATTGCAGGTGGTACGACACTTTTGGGAGCGGAACGACATGAAAGGCGCCATTAATGCCATGACAAAGCTTCCGGATCATTCGGTGCAAGCAGATGTGATCAGCGTTCTCGTTGACAAGATGGATGTCTTGACTCTAGATTTATTCTCATGCTTACTTCCTGTACTTGTGGGTTTATTGGATAGCAAGATAGAAAGGCATGCCAGTTTGTCAATGGAGATTCTAGTGAAGCTTGTAGCAGTTTTTGGTCATGTTATAAGCTCAGCAGTATCAGCACCTCCAGTAGTCGGTGTTGACCTTCATGCGGAACAGAGGGTACAATGCTGCAAGCAATGCTTTACCCAACTGCAGAAGGTTCAAAAAATTATTCCATCATTTGTAAGGAGAGGTGGTTCACTAGCTAGAAGTGCTCAGGAATTGAATCTAGTTCTTCAACAATGTTAA |
| Protein: MAKRGYKLQEFAAHSGNVNCLSIGKKACRLFITGGDDYKVNLWAIGKPNSLMSLCGHTNPVESVAFDSAEVLVLAGASSGAIKLWDLEEAKMVRTLSGHRSNCTAVEFHPFGEFFASGSRDTNLKIWDIRKKGCIHTYKGHTQGISTIKFTPDGRWVVSGGFDSAVKVWDLTAGKLMHDFKFHEGPIRSIDFHPLEFLLATGSADKTVKFWDLETFELIGSTRPEAAGVRAITFHPDGRTLFSGLDESLKVYSWEPVICHDSVDMGWSTLGDLCIHAGKLLSCSSYRNSVGVWVADVALIEPYGASSVSGQKEPKEQNLGSAFKNSLASKSTGSDLVTSNLQSLSPDYETKEIKNIYIDTTGGKPVSPQKAESLSSPKIVFALDSKEISYNASKKQNLASRVEVKSSELSKDKPPVIPCDSPEVKDPPSSVRESITFSKTRRGMLLRPAHIRKPSNSKIDLEKLSVSVDSSRKTDLERLPVVDSVNVCNTTNDLNKAPVQNLKTSVVSEVIHVDPCGTNSDLISIEKFEKIPSVSAETTSEQETCNKSVENSEGANSVKFVNGVAVVPGRTRTLVERFERREKTNDVQTTISPSNVLEPEKTREQTNSLEVQVVTPQILETEKTHEQTNDFRVHEVTMPSHVSETETRCERTSNYEVQAVAIPSHVSEPEKAREQTNNYEVRAMVIPRTPETKRMGINYEAKPRSNHEAKPRSNYEAKPRSNYEAKTRNNYEAKSTLISSHVPETDKTDNLQKGEPQISGRDSTSANDRDVIEDLMQSHDVFLSTLRSRLTKLQVVRHFWERNDMKGAINAMTKLPDHSVQADVISVLVDKMDVLTLDLFSCLLPVLVGLLDSKIERHASLSMEILVKLVAVFGHVISSAVSAPPVVGVDLHAEQRVQCCKQCFTQLQKVQKIIPSFVRRGGSLARSAQELNLVLQQC |